Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein | SAMEA3752620_02318 | Not Available | Positive | 2452826 - 2454862 | 72801.2 |
| endonuclease-like protein | SAMEA3752620_02319 | Not Available | Positive | 2454820 - 2455215 | 14824.6 |
| dnaa initiator-associating protein diaa | SAMEA3752620_02320 | Not Available | Positive | 2455235 - 2455825 | 21091.4 |
| putative phospholipid-binding protein | SAMEA3752620_02321 | Not Available | Positive | 2455835 - 2456410 | 20029.1 |
| permease | SAMEA3752620_02322 | Not Available | Negative | 2456523 - 2457563 | 37223.9 |
| nucleoside-diphosphate-sugar epimerase | SAMEA3752620_02323 | Not Available | Negative | 2457636 - 2458271 | 23187.3 |
| putative general stress protein | SAMEA3752620_02324 | Not Available | Positive | 2458399 - 2458917 | 18829.4 |
| conserved protein, upf0306 family | SAMEA3752620_02325 | Not Available | Negative | 2458897 - 2459340 | 16764.2 |
| giy-yig nuclease superfamily protein | SAMEA3752620_02326 | Not Available | Positive | 2459391 - 2459693 | 11242.5 |
| putative acetyltransferase | SAMEA3752620_02327 | Not Available | Negative | 2459680 - 2460183 | 18534.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





