Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative transposase | SAMEA3752620_04758 | Not Available | Negative | 4921811 - 4922497 | 26051.7 |
| Transposase | SAMEA3752620_04759 | Not Available | Negative | 4922645 - 4923640 | 37574.8 |
| Transposase | SAMEA3752620_04760 | Not Available | Negative | 4923591 - 4924265 | 26058.2 |
| Transposase | SAMEA3752620_04761 | Not Available | Negative | 4924269 - 4924619 | 13249.2 |
| Truncated transposase | SAMEA3752620_04762 | Not Available | Negative | 4924689 - 4924907 | 8584.45 |
| aec79 | SAMEA3752620_04763 | Not Available | Positive | 4925225 - 4925671 | 16782.2 |
| ybl125 | SAMEA3752620_04764 | Not Available | Positive | 4925843 - 4926082 | 9173.88 |
| Trna,type:asp,anti_codon:gtc; | Not Available | Not Available | Positive | 4926203 - 4926279 | Not Available |
| 3'-5' exonuclease | SAMEA3752620_04766 | Not Available | Negative | 4926412 - 4927152 | 27433.9 |
| Putative ribonuclease h | SAMEA3752620_04767 | Not Available | Positive | 4927208 - 4927675 | 17598.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





