Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts system n-acetylgalactosamine-specific transporter subunit iid | SAMEA3752620_02308 | Not Available | Positive | 2443977 - 2444855 | 31772.6 |
| n-acetylgalactosamine-specific pts system eiia component 2 | SAMEA3752620_02309 | Not Available | Positive | 2444873 - 2445307 | 15529.8 |
| n-acetylglucosamine-6-phosphate deacetylase (glcnac 6-p deacetylase) | SAMEA3752620_02310 | Not Available | Positive | 2445304 - 2446437 | 40316.8 |
| putative tagatose-6-phosphate ketose/aldose isomerase | SAMEA3752620_02311 | Not Available | Positive | 2446786 - 2447940 | 41824.8 |
| tagatose-1,6-bisphosphate aldolase | SAMEA3752620_02312 | Not Available | Positive | 2447953 - 2448813 | 31339.4 |
| n-acetylgalactosamine-specific pts system eiib component 1 | SAMEA3752620_02313 | Not Available | Positive | 2448980 - 2449456 | 17653.3 |
| n-acetylgalactosamine-specific pts system eiic component 1 | SAMEA3752620_02314 | Not Available | Positive | 2449495 - 2450298 | 28646.5 |
| pts system n-acetylgalactosamine-specific transporter subunit iid | SAMEA3752620_02315 | Not Available | Positive | 2450288 - 2451079 | 28976.1 |
| putative galactosamine-6-phosphate isomerase | SAMEA3752620_02316 | Not Available | Positive | 2451134 - 2451847 | 26569.2 |
| putative methyltransferase | SAMEA3752620_02317 | Not Available | Negative | 2451897 - 2452760 | 31478.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





