Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tartronate semialdehyde reductase | SAMEA3752620_02298 | Not Available | Negative | 2434374 - 2435264 | 30661.6 |
| 2-dehydro-3-deoxyglucarate aldolase | SAMEA3752620_02299 | Not Available | Negative | 2435294 - 2436064 | 27400.6 |
| galactarate transporter | SAMEA3752620_02300 | Not Available | Negative | 2436080 - 2437414 | 49030.1 |
| galactarate dehydratase | SAMEA3752620_02301 | Not Available | Positive | 2437789 - 2439360 | 56367.9 |
| htra suppressor protein | SAMEA3752620_02302 | Not Available | Positive | 2439509 - 2439844 | 12322.6 |
| toxin of the sohb(prlf)-yhav toxin-antitoxin system | SAMEA3752620_02303 | Not Available | Positive | 2439844 - 2440308 | 17778.0 |
| agar family transcriptional regulator | SAMEA3752620_02304 | Not Available | Negative | 2440363 - 2441172 | 29574.3 |
| putative tagatose 6-phosphate kinase | SAMEA3752620_02305 | Not Available | Positive | 2441421 - 2442701 | 47237.1 |
| pts system n-acetylgalactosamine-specific transporter subunit iib | SAMEA3752620_02306 | Not Available | Positive | 2442724 - 2443197 | 17056.8 |
| n-acetylgalactosamine-specific enzyme iic component of pts | SAMEA3752620_02307 | Not Available | Positive | 2443208 - 2443987 | 27350.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





