Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein | SAMEA3752620_02277 | Not Available | Positive | 2414245 - 2414649 | 15148.0 |
| cell division mukb-like protein | SAMEA3752620_02278 | Not Available | Positive | 2414639 - 2414938 | 11811.4 |
| doxx family protein | SAMEA3752620_02279 | Not Available | Positive | 2415035 - 2415517 | 17202.5 |
| putative glutathione s-transferase | SAMEA3752620_02280 | Not Available | Positive | 2415587 - 2416573 | 37409.1 |
| inner membrane protein yhah | SAMEA3752620_02281 | Not Available | Positive | 2416864 - 2417229 | 14281.7 |
| inner membrane protein | SAMEA3752620_02282 | Not Available | Positive | 2417472 - 2417828 | 13313.5 |
| lysr family transcriptional regulator | SAMEA3752620_02283 | Not Available | Negative | 2417879 - 2418775 | 33231.3 |
| pirin-related protein | SAMEA3752620_02284 | Not Available | Positive | 2418880 - 2419581 | 25939.0 |
| protein | SAMEA3752620_02285 | Not Available | Positive | 2419604 - 2419768 | 5935.07 |
| putative inner membrane protein | SAMEA3752620_02286 | Not Available | Negative | 2419900 - 2421210 | 45334.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





