Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative amino acid permease | SAMEA3752620_02256 | Not Available | Positive | 2391108 - 2392541 | 52175.7 |
| uncharacterised protein | SAMEA3752620_02257 | Not Available | Positive | 2392675 - 2393745 | 40137.6 |
| glycosyl hydrolase | SAMEA3752620_02258 | Not Available | Positive | 2393762 - 2396113 | 88320.8 |
| 2,4-dienoyl-coa reductase | SAMEA3752620_02259 | Not Available | Positive | 2396339 - 2398357 | 72698.7 |
| putative dna-binding protein | SAMEA3752620_02260 | Not Available | Negative | 2398402 - 2398818 | 14996.3 |
| putative enzyme | SAMEA3752620_02261 | Not Available | Negative | 2399089 - 2400225 | 42312.8 |
| metal dependent hydrolase | SAMEA3752620_02262 | Not Available | Positive | 2400310 - 2400813 | 19443.6 |
| thioredoxin-like protein | SAMEA3752620_02263 | Not Available | Positive | 2400890 - 2401573 | 25185.9 |
| putative oxidoreductase | SAMEA3752620_02264 | Not Available | Positive | 2401652 - 2402638 | 36347.4 |
| putative ph-induced membrane-bound redox modulator | SAMEA3752620_02266 | Not Available | Positive | 2402922 - 2403887 | 35983.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





