Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| g/u mismatch-specific dna glycosylase | SAMEA3752620_02246 | Not Available | Negative | 2379890 - 2380396 | 18674.5 |
| Trna-met | Not Available | Not Available | Positive | 2380521 - 2380596 | Not Available |
| siderophore-interacting protein | SAMEA3752620_02248 | Not Available | Negative | 2380650 - 2381414 | 28873.1 |
| putative transcriptional regulator | SAMEA3752620_02249 | Not Available | Positive | 2381703 - 2382326 | 23416.7 |
| aerotaxis receptor protein | SAMEA3752620_02250 | Not Available | Negative | 2382430 - 2383950 | 55033.0 |
| putrescine--2-oxoglutarate aminotransferase | SAMEA3752620_02251 | Not Available | Positive | 2384257 - 2385747 | 53795.3 |
| putative trna-binding protein | SAMEA3752620_02252 | Not Available | Negative | 2385789 - 2386121 | 12331.1 |
| ebg operon repressor | SAMEA3752620_02253 | Not Available | Positive | 2386340 - 2387323 | 36305.7 |
| cryptic beta-d-galactosidase subunit alpha | SAMEA3752620_02254 | Not Available | Positive | 2387507 - 2390599 | 117804.0 |
| evolved beta-galactosidase subunit beta | SAMEA3752620_02255 | Not Available | Positive | 2390596 - 2391045 | 17457.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





