Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase | SAMEA3752620_02236 | Not Available | Negative | 2369144 - 2369512 | 13620.2 |
| glycerol-3-phosphate acyltransferase plsy | SAMEA3752620_02237 | Not Available | Positive | 2369617 - 2370234 | 22194.7 |
| transcriptional activator ttdr | SAMEA3752620_02238 | Not Available | Negative | 2370247 - 2371179 | 35286.6 |
| l-tartrate dehydratase subunit alpha | SAMEA3752620_02239 | Not Available | Positive | 2371386 - 2372297 | 32664.4 |
| l-tartrate dehydratase subunit beta | SAMEA3752620_02240 | Not Available | Positive | 2372294 - 2372899 | 22680.8 |
| putative tartrate carrier protein | SAMEA3752620_02241 | Not Available | Positive | 2372948 - 2374411 | 52892.5 |
| o-sialoglycoprotein endopeptidase | SAMEA3752620_02242 | Not Available | Negative | 2374454 - 2375467 | 36009.5 |
| 30s ribosomal protein s21 | SAMEA3752620_02243 | Not Available | Positive | 2375705 - 2375920 | 8500.42 |
| dna primase | SAMEA3752620_02244 | Not Available | Positive | 2376031 - 2377776 | 65550.4 |
| rna polymerase | SAMEA3752620_02245 | Not Available | Positive | 2377971 - 2379812 | 70211.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





