Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yqic protein | SAMEA3752620_02225 | Not Available | Positive | 2356696 - 2356995 | 11415.8 |
| glycogen synthesis protein glgs | SAMEA3752620_02226 | Not Available | Negative | 2357030 - 2357230 | 7922.34 |
| membrane protein yqij | SAMEA3752620_02227 | Not Available | Positive | 2357499 - 2358128 | 23118.5 |
| inner membrane protein yqik | SAMEA3752620_02228 | Not Available | Positive | 2358155 - 2359816 | 60623.1 |
| bifunctional protein hlde | SAMEA3752620_02230 | Not Available | Negative | 2360235 - 2361668 | 51053.6 |
| bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase | SAMEA3752620_02231 | Not Available | Negative | 2361716 - 2364556 | 108430.0 |
| putative adenylate cyclase | SAMEA3752620_02232 | Not Available | Negative | 2364579 - 2365880 | 48516.9 |
| signal transduction protein | SAMEA3752620_02233 | Not Available | Positive | 2366122 - 2366742 | 23077.7 |
| multifunctional cca protein | SAMEA3752620_02234 | Not Available | Positive | 2366806 - 2368044 | 46524.8 |
| undecaprenyl pyrophosphate phosphatase | SAMEA3752620_02235 | Not Available | Negative | 2368232 - 2369053 | 29774.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





