Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucosamine--fructose-6-phosphate aminotransferase | SAMEA3752620_02204 | Not Available | Positive | 2336871 - 2337869 | 36976.4 |
| ribokinase | SAMEA3752620_02205 | Not Available | Positive | 2337874 - 2338788 | 32961.6 |
| uncharacterized protein conserved in bacteria | SAMEA3752620_02206 | Not Available | Positive | 2338816 - 2339940 | 41401.8 |
| oligogalacturonate-specific porin kdgm precursor | SAMEA3752620_02207 | Not Available | Positive | 2340075 - 2340770 | 27499.8 |
| outer membrane protein | SAMEA3752620_02208 | Not Available | Positive | 2340784 - 2341653 | 32975.9 |
| topoisomerase iv subunit b | SAMEA3752620_02209 | Not Available | Negative | 2341698 - 2343590 | 70247.9 |
| esterase | SAMEA3752620_02210 | Not Available | Negative | 2343619 - 2344200 | 21642.7 |
| putative phosphoesterase | SAMEA3752620_02211 | Not Available | Negative | 2344200 - 2345027 | 30939.7 |
| putative dehydrogenase | SAMEA3752620_02212 | Not Available | Negative | 2345052 - 2345474 | 16549.0 |
| adp-ribose pyrophosphatase | SAMEA3752620_02213 | Not Available | Negative | 2345475 - 2346104 | 23668.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





