Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative monooxygenase | SAMEA3752620_02194 | Not Available | Positive | 2325752 - 2326066 | 11533.1 |
| putative iron transport transcriptional regulator | SAMEA3752620_02195 | Not Available | Negative | 2326111 - 2326998 | 32280.5 |
| iron abc transporter substrate-binding protein | SAMEA3752620_02196 | Not Available | Negative | 2326995 - 2327942 | 34519.7 |
| iron compound abc transporter permease | SAMEA3752620_02197 | Not Available | Negative | 2327953 - 2329002 | 37018.1 |
| iron compound abc transporter permease | SAMEA3752620_02198 | Not Available | Negative | 2328999 - 2329982 | 33855.0 |
| ferric enterobactin transport atp-binding protein fepc | SAMEA3752620_02199 | Not Available | Negative | 2329979 - 2330788 | 29932.5 |
| tonb-dependent receptor | SAMEA3752620_02200 | Not Available | Positive | 2331162 - 2333303 | 78584.5 |
| sugar transport protein | SAMEA3752620_02201 | Not Available | Negative | 2333411 - 2334742 | 49565.2 |
| gntr family transcriptional regulator | SAMEA3752620_02202 | Not Available | Positive | 2335029 - 2335781 | 28595.6 |
| putative adp-ribosylglycohydrolase | SAMEA3752620_02203 | Not Available | Positive | 2335795 - 2336871 | 37856.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





