Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| radical sam superfamily protein | SAMEA3752620_02184 | Not Available | Negative | 2313046 - 2315265 | 83527.5 |
| sufi protein | SAMEA3752620_02185 | Not Available | Negative | 2315376 - 2316788 | 51834.1 |
| 1-acylglycerol-3-phosphate o-acyltransferase | SAMEA3752620_02186 | Not Available | Negative | 2316863 - 2317600 | 27424.7 |
| topoisomerase iv subunit a | SAMEA3752620_02187 | Not Available | Negative | 2317834 - 2320092 | 83832.3 |
| binding protein | SAMEA3752620_02188 | Not Available | Negative | 2320230 - 2321837 | 60825.4 |
| putative regulatory protein | SAMEA3752620_02189 | Not Available | Negative | 2321946 - 2322428 | 17916.4 |
| protein ygiw | SAMEA3752620_02190 | Not Available | Negative | 2322481 - 2322873 | 14011.5 |
| two-component system response regulator | SAMEA3752620_02191 | Not Available | Positive | 2323025 - 2323684 | 24703.2 |
| two-component system sensor kinase | SAMEA3752620_02192 | Not Available | Positive | 2323681 - 2325030 | 50222.6 |
| modulator of drug activity b | SAMEA3752620_02193 | Not Available | Positive | 2325140 - 2325721 | 21926.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





