Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase | SAMEA3752620_02174 | Not Available | Positive | 2304015 - 2304899 | 31492.8 |
| biopolymer transport protein | SAMEA3752620_02175 | Not Available | Negative | 2304938 - 2305363 | 15527.9 |
| biopolymer transport protein | SAMEA3752620_02176 | Not Available | Negative | 2305370 - 2306104 | 26289.0 |
| cystathionine beta-lyase | SAMEA3752620_02177 | Not Available | Positive | 2306356 - 2307543 | 43200.7 |
| inner membrane protein | SAMEA3752620_02178 | Not Available | Positive | 2307683 - 2308342 | 24135.3 |
| transcriptional regulator yqhc | SAMEA3752620_02179 | Not Available | Negative | 2308382 - 2309338 | 36023.0 |
| putative alcohol dehydrogenase | SAMEA3752620_02180 | Not Available | Positive | 2309475 - 2310638 | 42099.4 |
| 2,5-diketo-d-gluconic acid reductase a | SAMEA3752620_02181 | Not Available | Positive | 2310743 - 2311570 | 31197.5 |
| protein of uncharacterised function (duf3828) | SAMEA3752620_02182 | Not Available | Positive | 2311770 - 2312696 | 35011.1 |
| putative lipoprotein | SAMEA3752620_02183 | Not Available | Positive | 2312747 - 2313004 | 9499.55 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





