Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ybl138 | SAMEA3752620_02154 | Not Available | Negative | 2284585 - 2285409 | 32014.7 |
| membrane protein, conserved protein | SAMEA3752620_02155 | Not Available | Negative | 2285409 - 2286758 | 48652.0 |
| atp-binding protein yghr | SAMEA3752620_02156 | Not Available | Negative | 2286804 - 2287562 | 28112.1 |
| nucleoside triphosphate hydrolase domain | SAMEA3752620_02157 | Not Available | Negative | 2287594 - 2288292 | 25656.4 |
| atp-binding protein yght | SAMEA3752620_02158 | Not Available | Positive | 2288481 - 2289173 | 25330.1 |
| low-affinity inorganic phosphate transporter 2 | SAMEA3752620_02159 | Not Available | Negative | 2289222 - 2290721 | 53842.1 |
| bifunctional glutathionylspermidine synthetase/amidase | SAMEA3752620_02160 | Not Available | Negative | 2291013 - 2292872 | 70522.7 |
| glutathione s-transferase | SAMEA3752620_02161 | Not Available | Positive | 2293077 - 2293943 | 32386.4 |
| hydrogenase-2 component protein | SAMEA3752620_02162 | Not Available | Negative | 2294066 - 2294314 | 8808.67 |
| hydrogenase nickel incorporation protein hybf | SAMEA3752620_02163 | Not Available | Negative | 2294327 - 2294668 | 12698.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





