Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycolate oxidase subunit | SAMEA3752620_02144 | Not Available | Negative | 2273681 - 2275180 | 53781.8 |
| dna-binding transcriptional regulator glcc | SAMEA3752620_02145 | Not Available | Positive | 2275431 - 2276195 | 28796.9 |
| dna-binding transcriptional regulator | SAMEA3752620_02146 | Not Available | Negative | 2276202 - 2277344 | 43432.7 |
| amp-binding protein | SAMEA3752620_02147 | Not Available | Positive | 2277715 - 2279439 | 63302.7 |
| acyl-coa synthetase | SAMEA3752620_02148 | Not Available | Positive | 2279436 - 2280350 | 33642.4 |
| putative acyl carrier protein | SAMEA3752620_02149 | Not Available | Positive | 2280382 - 2280630 | 9417.69 |
| putative aminotransferase | SAMEA3752620_02150 | Not Available | Positive | 2280630 - 2281802 | 41870.2 |
| putative permease | SAMEA3752620_02151 | Not Available | Negative | 2281837 - 2282916 | 39816.4 |
| putative permease | SAMEA3752620_02152 | Not Available | Negative | 2282913 - 2283983 | 39882.1 |
| transcriptional regulator | SAMEA3752620_02153 | Not Available | Negative | 2284013 - 2284573 | 20801.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





