Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein d | SAMEA3752620_02133 | Not Available | Negative | 2257801 - 2259258 | 52177.5 |
| type ii secretion protein gspc | SAMEA3752620_02134 | Not Available | Negative | 2259288 - 2260130 | 30975.4 |
| type ii secretion system lipoprotein | SAMEA3752620_02135 | Not Available | Negative | 2260265 - 2260675 | 14686.8 |
| prepilin peptidase a | SAMEA3752620_02136 | Not Available | Negative | 2260741 - 2261550 | 29404.7 |
| inner membrane lipoprotein | SAMEA3752620_02137 | Not Available | Negative | 2261714 - 2266270 | 167158.0 |
| glycolate permease | SAMEA3752620_02138 | Not Available | Negative | 2266755 - 2268437 | 58923.7 |
| malate synthase g | SAMEA3752620_02140 | Not Available | Negative | 2268793 - 2270964 | 80580.3 |
| protein glcg | SAMEA3752620_02141 | Not Available | Negative | 2270986 - 2271390 | 13737.5 |
| glycolate oxidase iron-sulfur subunit | SAMEA3752620_02142 | Not Available | Negative | 2271395 - 2272618 | 45138.9 |
| glycolate oxidase subunit | SAMEA3752620_02143 | Not Available | Negative | 2272629 - 2273681 | 38253.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





