Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid-a-disaccharide synthase | SAMEA3752620_02103 | Not Available | Positive | 2228684 - 2229832 | 42357.9 |
| ribonuclease hii | SAMEA3752620_02104 | Not Available | Positive | 2229829 - 2230425 | 21483.2 |
| dna polymerase iii subunit alpha | SAMEA3752620_02105 | Not Available | Positive | 2230462 - 2233944 | 129928.0 |
| acetyl-coa carboxylase | SAMEA3752620_02106 | Not Available | Positive | 2233957 - 2234916 | 35243.6 |
| lysine decarboxylase, constitutive | SAMEA3752620_02107 | Not Available | Positive | 2235014 - 2237155 | 80626.9 |
| glyoxylase i family protein | SAMEA3752620_02108 | Not Available | Positive | 2237212 - 2237601 | 14739.5 |
| trna(ile)-lysidine synthetase | SAMEA3752620_02109 | Not Available | Positive | 2237666 - 2238979 | 48554.5 |
| rho-binding antiterminator | SAMEA3752620_02110 | Not Available | Negative | 2239013 - 2239273 | 9640.41 |
| putative cytoplasmic protein | SAMEA3752620_02111 | Not Available | Negative | 2239260 - 2239460 | 7214.59 |
| yaeq family protein | SAMEA3752620_02112 | Not Available | Positive | 2239626 - 2240171 | 20847.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





