Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome recycling factor | SAMEA3752620_02093 | Not Available | Positive | 2218208 - 2218765 | 20639.7 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | SAMEA3752620_02094 | Not Available | Positive | 2218857 - 2220053 | 43390.5 |
| undecaprenyl pyrophosphate synthetase | SAMEA3752620_02095 | Not Available | Positive | 2220242 - 2221000 | 28314.5 |
| cdp-diglyceride synthase | SAMEA3752620_02096 | Not Available | Positive | 2221121 - 2221870 | 27628.5 |
| zinc metallopeptidase rsep | SAMEA3752620_02097 | Not Available | Positive | 2221882 - 2223234 | 49088.3 |
| outer membrane protein assembly factor | SAMEA3752620_02098 | Not Available | Positive | 2223264 - 2225696 | 90557.5 |
| chaperone protein | SAMEA3752620_02099 | Not Available | Positive | 2225818 - 2226303 | 17689.2 |
| udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferase | SAMEA3752620_02100 | Not Available | Positive | 2226307 - 2227332 | 36026.7 |
| (3r)-hydroxymyristoyl-acp dehydratase | SAMEA3752620_02101 | Not Available | Positive | 2227437 - 2227892 | 17034.0 |
| acyl-[acyl-carrier-protein]--udp-n-acetylglucos am ine o-acyltransferase | SAMEA3752620_02102 | Not Available | Positive | 2227896 - 2228684 | 28081.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





