Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate diacid regulator | SAMEA3752620_02082 | Not Available | Positive | 2207778 - 2208935 | 43659.1 |
| uncharacterised protein | SAMEA3752620_02083 | Not Available | Positive | 2208904 - 2209122 | 8296.83 |
| putative structural protein | SAMEA3752620_02084 | Not Available | Negative | 2209050 - 2209436 | 15111.0 |
| phosphodiesterase yaei | SAMEA3752620_02085 | Not Available | Negative | 2209594 - 2210406 | 29953.3 |
| 2,3,4,5-tetrahydropyridine-2,6-carboxylate n-succinyltransferase | SAMEA3752620_02086 | Not Available | Negative | 2210459 - 2211283 | 29893.8 |
| [protein-pii] uridylyltransferase | SAMEA3752620_02087 | Not Available | Negative | 2211314 - 2213986 | 102420.0 |
| methionine aminopeptidase | SAMEA3752620_02088 | Not Available | Negative | 2214048 - 2214842 | 29332.5 |
| 30s ribosomal protein s2 | SAMEA3752620_02090 | Not Available | Positive | 2215210 - 2215935 | 26745.2 |
| elongation factor ts | SAMEA3752620_02091 | Not Available | Positive | 2216193 - 2217044 | 30424.7 |
| uridylate kinase | SAMEA3752620_02092 | Not Available | Positive | 2217191 - 2217916 | 25971.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





