Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron-hydroxamate transporter substrate-binding subunit | SAMEA3752620_02072 | Not Available | Positive | 2196013 - 2196903 | 33079.4 |
| ferrichrome transport system permease | SAMEA3752620_02073 | Not Available | Positive | 2196900 - 2198882 | 70412.6 |
| glutamate-1-semialdehyde 2,1-aminomutase | SAMEA3752620_02074 | Not Available | Negative | 2198917 - 2200197 | 45415.7 |
| h(+)/cl(-) exchange transporter | SAMEA3752620_02075 | Not Available | Positive | 2200422 - 2201843 | 50351.9 |
| iron-sulfur cluster insertion protein erpa | SAMEA3752620_02076 | Not Available | Positive | 2201925 - 2202269 | 12101.2 |
| putative membrane protein yads | SAMEA3752620_02077 | Not Available | Negative | 2202316 - 2202939 | 22205.2 |
| vitamin b12-binding protein | SAMEA3752620_02078 | Not Available | Negative | 2202977 - 2203777 | 29380.5 |
| mta/sah nucleosidase | SAMEA3752620_02079 | Not Available | Negative | 2203770 - 2204468 | 24355.4 |
| deoxyguanosinetriphosphate triphosphohydrolase | SAMEA3752620_02080 | Not Available | Positive | 2204552 - 2206069 | 59351.1 |
| protease do precursor | SAMEA3752620_02081 | Not Available | Positive | 2206199 - 2207623 | 49357.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





