Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transposase | SAMEA3752620_02052 | Not Available | Positive | 2173184 - 2173399 | 8306.08 |
| pantoate--beta-alanine ligase | SAMEA3752620_02053 | Not Available | Negative | 2173495 - 2174346 | 31593.5 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | SAMEA3752620_02054 | Not Available | Negative | 2174358 - 2175152 | 28151.0 |
| fimbrial adhesin yadc precursor | SAMEA3752620_02055 | Not Available | Negative | 2175264 - 2176529 | 45990.8 |
| protein yadk | SAMEA3752620_02056 | Not Available | Negative | 2176579 - 2177175 | 21207.2 |
| putative fimbrial-like adhesin protein yadl | SAMEA3752620_02057 | Not Available | Negative | 2177202 - 2177810 | 20812.8 |
| putative fimbrial subunit yadm precursor | SAMEA3752620_02058 | Not Available | Negative | 2177822 - 2178394 | 20279.1 |
| outer membrane usher protein | SAMEA3752620_02059 | Not Available | Negative | 2178411 - 2181011 | 95728.0 |
| chaperone protein ecpd | SAMEA3752620_02060 | Not Available | Negative | 2181046 - 2181786 | 26714.8 |
| fimbrial-like adhesin protein | SAMEA3752620_02061 | Not Available | Negative | 2181895 - 2182485 | 20313.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





