Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ftsz stabilizer | SAMEA3752620_02021 | Not Available | Negative | 2137186 - 2137929 | 28291.3 |
| dephospho-coa kinase | SAMEA3752620_02022 | Not Available | Negative | 2137929 - 2138549 | 22609.0 |
| gmp reductase | SAMEA3752620_02023 | Not Available | Positive | 2138774 - 2139817 | 37385.8 |
| protein transport protein hofc | SAMEA3752620_02024 | Not Available | Negative | 2139852 - 2141054 | 44304.2 |
| protein transport protein hofb | SAMEA3752620_02025 | Not Available | Negative | 2141044 - 2142429 | 50683.5 |
| prepilin peptidase dependent protein d precursor | SAMEA3752620_02026 | Not Available | Negative | 2142439 - 2142879 | 15622.7 |
| quinolinate phosphoribosyltransferase | SAMEA3752620_02027 | Not Available | Negative | 2143082 - 2143975 | 32775.0 |
| n-acetyl-anhydromuramyl-l-alanine-amidase | SAMEA3752620_02028 | Not Available | Positive | 2144063 - 2144614 | 20576.2 |
| ampe protein | SAMEA3752620_02029 | Not Available | Positive | 2144611 - 2145465 | 32123.9 |
| aromatic amino acid transport protein | SAMEA3752620_02030 | Not Available | Negative | 2145508 - 2146878 | 49561.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





