Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylglucosamine--n-acetylmuramyl-(penta pe ptide pyrophosphoryl-undecaprenol n-acetylglucosamine transferase | SAMEA3752620_02010 | Not Available | Positive | 2124980 - 2126047 | 37788.9 |
| udp-n-acetylmuramate:alanine ligase | SAMEA3752620_02011 | Not Available | Positive | 2126101 - 2127576 | 53600.2 |
| d-alanine--d-alanine ligase | SAMEA3752620_02012 | Not Available | Positive | 2127569 - 2128489 | 32841.6 |
| cell division protein ftsq | SAMEA3752620_02013 | Not Available | Positive | 2128491 - 2129321 | 31421.6 |
| cell division protein ftsa | SAMEA3752620_02014 | Not Available | Positive | 2129318 - 2130580 | 45332.7 |
| cell division protein ftsz | SAMEA3752620_02015 | Not Available | Positive | 2130641 - 2131792 | 40326.4 |
| udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase | SAMEA3752620_02016 | Not Available | Positive | 2131893 - 2132810 | 33957.8 |
| secretion monitor family proten | SAMEA3752620_02017 | Not Available | Positive | 2132869 - 2133552 | 25372.2 |
| 7,8-dihydro-8-oxoguanine-triphosphatase | SAMEA3752620_02019 | Not Available | Positive | 2136379 - 2136777 | 15148.2 |
| zinc-binding protein | SAMEA3752620_02020 | Not Available | Negative | 2136979 - 2137176 | 7306.49 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





