Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-j like membrane chaperone protein | SAMEA3752620_01977 | Not Available | Positive | 2085247 - 2086128 | 33125.4 |
| ribosomal large subunit pseudouridine synthase a | SAMEA3752620_01978 | Not Available | Negative | 2086246 - 2086905 | 24848.0 |
| rna polymerase-associated protein | SAMEA3752620_01979 | Not Available | Negative | 2086917 - 2089823 | 109776.0 |
| dna polymerase ii | SAMEA3752620_01980 | Not Available | Negative | 2089987 - 2092338 | 90015.6 |
| l-ribulose-5-phosphate 4-epimerase | SAMEA3752620_01981 | Not Available | Negative | 2092413 - 2093108 | 25428.3 |
| l-arabinose isomerase | SAMEA3752620_01982 | Not Available | Negative | 2093393 - 2094895 | 56106.2 |
| ribulokinase | SAMEA3752620_01983 | Not Available | Negative | 2094906 - 2096606 | 61228.8 |
| dna-binding transcriptional regulator arac | SAMEA3752620_01984 | Not Available | Positive | 2096945 - 2097823 | 33385.8 |
| deda family integral membrane protein | SAMEA3752620_01985 | Not Available | Positive | 2097909 - 2098673 | 28213.8 |
| thiamine transporter atp-binding subunit | SAMEA3752620_01986 | Not Available | Negative | 2098787 - 2099485 | 25051.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





