Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrofolate reductase | SAMEA3752620_01967 | Not Available | Positive | 2077089 - 2077703 | 23342.6 |
| putative antitoxin of gyrase inhibiting toxin-antitoxin system | SAMEA3752620_01968 | Not Available | Positive | 2077789 - 2078022 | 8543.03 |
| putative toxin of gyrase inhibiting toxin-antitoxin system | SAMEA3752620_01969 | Not Available | Positive | 2078025 - 2078213 | 7167.89 |
| putative toxin of gyrase inhibiting toxin-antitoxin system | SAMEA3752620_01970 | Not Available | Positive | 2078210 - 2078326 | 4046.92 |
| bis(5'-nucleosyl)-tetraphosphatase | SAMEA3752620_01971 | Not Available | Negative | 2078323 - 2079171 | 31502.6 |
| apag protein | SAMEA3752620_01972 | Not Available | Negative | 2079178 - 2079555 | 13867.6 |
| dimethyladenosine transferase (s-adenosylmethionine-6-n',n'-adenosyl (rrna) dimethyltransferase) | SAMEA3752620_01973 | Not Available | Negative | 2079558 - 2080379 | 30422.0 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | SAMEA3752620_01974 | Not Available | Negative | 2080376 - 2081365 | 35165.0 |
| chaperone precursor (peptidyl-prolyl cis-trans isomerase) | SAMEA3752620_01975 | Not Available | Negative | 2081365 - 2082651 | 47286.5 |
| organic solvent tolerance protein | SAMEA3752620_01976 | Not Available | Negative | 2082704 - 2085058 | 89686.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





