Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crotonobetainyl-coa:carnitine coa-transferase | SAMEA3752620_01957 | Not Available | Negative | 2065307 - 2066524 | 45071.2 |
| crotonobetainyl-coa dehydrogenase | SAMEA3752620_01958 | Not Available | Negative | 2066642 - 2067784 | 42560.8 |
| l-carnitine/gamma-butyrobetaine antiporter | SAMEA3752620_01959 | Not Available | Negative | 2067815 - 2069329 | 56634.4 |
| electron transfer flavoprotein fixa | SAMEA3752620_01960 | Not Available | Positive | 2069802 - 2070572 | 27173.3 |
| electron transfer flavoprotein subunit of oxidoreductase | SAMEA3752620_01961 | Not Available | Positive | 2070587 - 2071528 | 33486.0 |
| fad-dependent oxidoreductase | SAMEA3752620_01962 | Not Available | Positive | 2071579 - 2072865 | 45671.6 |
| ferredoxin-like protein | SAMEA3752620_01963 | Not Available | Positive | 2072862 - 2073149 | 10479.5 |
| major facilitator superfamily protein | SAMEA3752620_01964 | Not Available | Positive | 2073208 - 2074539 | 48669.8 |
| glutathione-regulated potassium-efflux system ancillary protein | SAMEA3752620_01965 | Not Available | Positive | 2074647 - 2075177 | 20171.1 |
| glutathione-regulated potassium-efflux system protein kefc | SAMEA3752620_01966 | Not Available | Positive | 2075170 - 2077032 | 67710.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





