Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fkbb-type 16 kd peptidyl-prolyl cis-trans isomerase | SAMEA3752620_01947 | Not Available | Positive | 2053203 - 2053652 | 16081.9 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | SAMEA3752620_01948 | Not Available | Positive | 2053654 - 2054604 | 34806.6 |
| nonspecific ribonucleoside hydrolase (purine/pyrimidine ribonucleoside hydrolase) | SAMEA3752620_01949 | Not Available | Positive | 2054670 - 2055584 | 32669.8 |
| dihydrodipicolinate reductase | SAMEA3752620_01950 | Not Available | Positive | 2055751 - 2056572 | 28772.4 |
| carbamoyl phosphate synthase small subunit | SAMEA3752620_01951 | Not Available | Positive | 2057028 - 2058176 | 41459.4 |
| carbamoyl-phosphate synthase large subunit | SAMEA3752620_01952 | Not Available | Positive | 2058194 - 2061415 | 117930.0 |
| caif family transcriptional regulator | SAMEA3752620_01953 | Not Available | Positive | 2061676 - 2062071 | 15363.0 |
| carnitine operon protein caie | SAMEA3752620_01954 | Not Available | Negative | 2062191 - 2062781 | 21176.6 |
| carnitinyl-coa dehydratase | SAMEA3752620_01955 | Not Available | Negative | 2062787 - 2063572 | 28177.8 |
| crotonobetaine/carnitine-coa ligase | SAMEA3752620_01956 | Not Available | Negative | 2063681 - 2065234 | 58591.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





