Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative oxidoreductase | SAMEA3752620_01935 | Not Available | Negative | 2040506 - 2041219 | 26692.6 |
| protein | SAMEA3752620_01936 | Not Available | Negative | 2041245 - 2041649 | 14506.4 |
| chaperone protein dnak (heat shock protein 70) (heat shock 70 kdaprotein) (hsp70) | SAMEA3752620_01937 | Not Available | Positive | 2042025 - 2043941 | 69118.9 |
| chaperone protein dnaj | SAMEA3752620_01939 | Not Available | Positive | 2044030 - 2045160 | 41046.7 |
| na(+)/h(+) antiporter 1 | SAMEA3752620_01941 | Not Available | Positive | 2046002 - 2047168 | 41332.2 |
| transcriptional activator nhar | SAMEA3752620_01942 | Not Available | Positive | 2047234 - 2048133 | 34074.9 |
| 30s ribosomal protein s20 | SAMEA3752620_01943 | Not Available | Negative | 2048229 - 2048492 | 9684.94 |
| riboflavin biosynthesis protein | SAMEA3752620_01944 | Not Available | Positive | 2048821 - 2049762 | 34736.4 |
| isoleucyl-trna synthetase | SAMEA3752620_01945 | Not Available | Positive | 2049805 - 2052621 | 104360.0 |
| lipoprotein signal peptidase | SAMEA3752620_01946 | Not Available | Positive | 2052621 - 2053115 | 18129.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





