Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna methyltransferase | SAMEA3752620_01924 | Not Available | Positive | 2029154 - 2029840 | 25303.6 |
| bifunctional aspartokinase i/homoserine dehydrogenase i | SAMEA3752620_01926 | Not Available | Positive | 2030200 - 2032662 | 89114.5 |
| homoserine kinase | SAMEA3752620_01927 | Not Available | Positive | 2032664 - 2033596 | 33611.6 |
| threonine synthase | SAMEA3752620_01928 | Not Available | Positive | 2033597 - 2034883 | 47072.4 |
| protein | SAMEA3752620_01929 | Not Available | Positive | 2035097 - 2035393 | 11339.5 |
| peroxide resistance protein, lowers intracellular iron | SAMEA3752620_01930 | Not Available | Negative | 2035546 - 2036322 | 29597.5 |
| putative transport protein | SAMEA3752620_01931 | Not Available | Negative | 2036392 - 2037822 | 51706.0 |
| transaldolase b | SAMEA3752620_01932 | Not Available | Positive | 2038101 - 2039054 | 35207.1 |
| molybdopterin biosynthesis mog protein | SAMEA3752620_01933 | Not Available | Positive | 2039169 - 2039756 | 21179.6 |
| putative membrane protein yaah | SAMEA3752620_01934 | Not Available | Negative | 2039791 - 2040357 | 20072.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





