Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| murein transglycosylase | SAMEA3752620_01914 | Not Available | Positive | 2019096 - 2021033 | 73357.1 |
| trp operon repressor | SAMEA3752620_01915 | Not Available | Positive | 2021153 - 2021449 | 11370.8 |
| ntpase | SAMEA3752620_01916 | Not Available | Negative | 2021443 - 2021958 | 18365.8 |
| phosphoglycerate mutase | SAMEA3752620_01917 | Not Available | Positive | 2022010 - 2022657 | 24016.5 |
| right origin-binding protein | SAMEA3752620_01918 | Not Available | Negative | 2022654 - 2023523 | 33146.8 |
| crea protein | SAMEA3752620_01919 | Not Available | Positive | 2023734 - 2024207 | 17108.8 |
| two-component response regulator | SAMEA3752620_01920 | Not Available | Positive | 2024220 - 2024909 | 26126.7 |
| two-component system sensor kinase | SAMEA3752620_01921 | Not Available | Positive | 2024909 - 2026333 | 52233.4 |
| inner membrane protein | SAMEA3752620_01922 | Not Available | Positive | 2026391 - 2027743 | 49839.8 |
| aerobic respiration control protein arca | SAMEA3752620_01923 | Not Available | Negative | 2027802 - 2028518 | 27293.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





