Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| purine nucleoside phosphorylase | SAMEA3752620_01904 | Not Available | Positive | 2009706 - 2010425 | 25937.4 |
| putative transcriptional regulator | SAMEA3752620_01905 | Not Available | Negative | 2010586 - 2010849 | 9901.29 |
| lipoate-protein ligase a | SAMEA3752620_01906 | Not Available | Negative | 2010881 - 2011897 | 37914.9 |
| smp protein precursor | SAMEA3752620_01907 | Not Available | Negative | 2011925 - 2012569 | 24084.2 |
| phosphoserine phosphatase serb | SAMEA3752620_01908 | Not Available | Positive | 2012675 - 2013643 | 35117.8 |
| dna repair protein rada | SAMEA3752620_01909 | Not Available | Positive | 2013692 - 2015074 | 49445.0 |
| transcriptional regulator | SAMEA3752620_01910 | Not Available | Positive | 2015095 - 2016327 | 47334.4 |
| transcription elongation factor greb | SAMEA3752620_01911 | Not Available | Positive | 2016419 - 2016751 | 12315.3 |
| merr family transcriptional regulator | SAMEA3752620_01912 | Not Available | Positive | 2016753 - 2017037 | 10552.6 |
| putative abc transporter atp-binding protein yjjk | SAMEA3752620_01913 | Not Available | Negative | 2017093 - 2018760 | 62473.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





