Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor 3 | SAMEA3752620_01894 | Not Available | Positive | 1998417 - 2000006 | 59577.5 |
| periplasmic protein | SAMEA3752620_01895 | Not Available | Positive | 2000399 - 2001004 | 21113.9 |
| protein | SAMEA3752620_01896 | Not Available | Positive | 2001131 - 2001292 | 5536.27 |
| patatin-like phospholipase | SAMEA3752620_01897 | Not Available | Positive | 2001414 - 2002487 | 39896.2 |
| putative deoxyribonuclease | SAMEA3752620_01898 | Not Available | Positive | 2002484 - 2003263 | 28937.9 |
| radical sam superfamily protein | SAMEA3752620_01899 | Not Available | Negative | 2003480 - 2004184 | 25608.2 |
| glycine radical enzyme, yjji family | SAMEA3752620_01900 | Not Available | Negative | 2004315 - 2005865 | 58065.4 |
| deoxyribose-phosphate aldolase | SAMEA3752620_01901 | Not Available | Positive | 2006123 - 2006902 | 27749.3 |
| thymidine phosphorylase | SAMEA3752620_01902 | Not Available | Positive | 2007029 - 2008351 | 47182.9 |
| phosphopentomutase | SAMEA3752620_01903 | Not Available | Positive | 2008403 - 2009626 | 44395.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





