Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferric iron reductase protein | SAMEA3752620_01884 | Not Available | Negative | 1993947 - 1994735 | 30123.4 |
| protein | SAMEA3752620_01885 | Not Available | Positive | 1994876 - 1995112 | 8689.41 |
| Trna-leu | Not Available | Not Available | Positive | 1995151 - 1995236 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 1995271 - 1995357 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 1995386 - 1995472 | Not Available |
| uncharacterised protein | SAMEA3752620_01889 | Not Available | Negative | 1995538 - 1995660 | 4531.51 |
| ribosomal rna small subunit methyltransferase c | SAMEA3752620_01890 | Not Available | Negative | 1995672 - 1996703 | 37660.9 |
| dna polymerase iii subunit psi | SAMEA3752620_01891 | Not Available | Positive | 1996806 - 1997219 | 15208.3 |
| ribosomal-protein-alanine acetyltransferase | SAMEA3752620_01892 | Not Available | Positive | 1997188 - 1997634 | 16610.7 |
| 5'-nucleotidase (nucleoside 5'-monophosphate phosphohydrolase) | SAMEA3752620_01893 | Not Available | Positive | 1997649 - 1998326 | 25278.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





