Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | SAMEA3752620_01874 | Not Available | Negative | 1984006 - 1984920 | 35462.2 |
| putative zinc-binding dehydrogenase | SAMEA3752620_01875 | Not Available | Positive | 1985059 - 1986081 | 36512.1 |
| phosphoglycerol transferase i (phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase) | SAMEA3752620_01876 | Not Available | Negative | 1986221 - 1988512 | 85431.6 |
| putative glycoprotein/receptor | SAMEA3752620_01877 | Not Available | Negative | 1988766 - 1989260 | 17394.7 |
| dna replication protein | SAMEA3752620_01878 | Not Available | Negative | 1989309 - 1990046 | 27936.8 |
| primosomal protein i | SAMEA3752620_01879 | Not Available | Negative | 1990049 - 1990588 | 19470.2 |
| putative inner membrane protein yjjb | SAMEA3752620_01880 | Not Available | Negative | 1990696 - 1991169 | 17031.6 |
| structural protein | SAMEA3752620_01881 | Not Available | Negative | 1991160 - 1991930 | 27952.6 |
| transcriptional regulator | SAMEA3752620_01882 | Not Available | Positive | 1992550 - 1993275 | 27033.6 |
| bglj family transcriptional regulator | SAMEA3752620_01883 | Not Available | Positive | 1993233 - 1993910 | 25604.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





