Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aec77 | SAMEA3752620_01813 | Not Available | Positive | 1921703 - 1922191 | 18031.4 |
| aec78 | SAMEA3752620_01814 | Not Available | Positive | 1922211 - 1922408 | 7426.84 |
| putative restriction methylase | SAMEA3752620_01815 | Not Available | Positive | 1922493 - 1922639 | 5222.24 |
| uncharacterised protein | SAMEA3752620_01816 | Not Available | Positive | 1922878 - 1923096 | 8179.0 |
| uncharacterised protein | SAMEA3752620_01817 | Not Available | Positive | 1923592 - 1925628 | 78917.4 |
| putative restriction endonuclease | SAMEA3752620_01818 | Not Available | Negative | 1926251 - 1927123 | 33223.6 |
| endonuclease | SAMEA3752620_01819 | Not Available | Positive | 1927260 - 1927910 | 24311.3 |
| yjhs protein | SAMEA3752620_01820 | Not Available | Negative | 1927918 - 1928898 | 36708.7 |
| n-acetylneuraminic acid mutarotase | SAMEA3752620_01821 | Not Available | Negative | 1928963 - 1930069 | 39587.2 |
| n-acetylneuraminic acid outer membrane porin | SAMEA3752620_01822 | Not Available | Negative | 1930089 - 1930805 | 27889.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





