Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein conserved in bacteria | SAMEA3752620_01782 | Not Available | Negative | 1896870 - 1897049 | 6538.7 |
| para-aminobenzoate synthase component i | SAMEA3752620_01783 | Not Available | Positive | 1897123 - 1898484 | 50974.3 |
| nudix-family hydrolase | SAMEA3752620_01784 | Not Available | Positive | 1898488 - 1899066 | 21464.9 |
| l-serine deaminase 1 | SAMEA3752620_01785 | Not Available | Positive | 1899250 - 1900614 | 48909.5 |
| putative signal transduction protein | SAMEA3752620_01786 | Not Available | Positive | 1900745 - 1902343 | 59653.8 |
| membrane protein | SAMEA3752620_01787 | Not Available | Negative | 1902347 - 1903903 | 56462.4 |
| cytoplasmic protein | SAMEA3752620_01788 | Not Available | Negative | 1903891 - 1904100 | 8073.75 |
| mannose-specific pts system eiiab component | SAMEA3752620_01789 | Not Available | Positive | 1904366 - 1905337 | 35079.6 |
| mannose-specific pts system transporter subunit iic | SAMEA3752620_01790 | Not Available | Positive | 1905400 - 1906200 | 27637.6 |
| mannose-specific pts system eiid component | SAMEA3752620_01791 | Not Available | Positive | 1906213 - 1907064 | 30957.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





