Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | SAMEA3752620_01761 | Not Available | Negative | 1876855 - 1877673 | 30413.1 |
| major facilitator superfamily protein | SAMEA3752620_01762 | Not Available | Positive | 1877773 - 1878954 | 41253.9 |
| putative cytoplasmic protein | SAMEA3752620_01763 | Not Available | Positive | 1879009 - 1879356 | 13355.9 |
| outer membrane protein | SAMEA3752620_01764 | Not Available | Negative | 1879378 - 1879632 | 8942.87 |
| putative signal transduction protein | SAMEA3752620_01765 | Not Available | Positive | 1879815 - 1880840 | 38521.8 |
| putative transglycosylase associated protein | SAMEA3752620_01766 | Not Available | Negative | 1881107 - 1881355 | 8671.14 |
| protein | SAMEA3752620_01767 | Not Available | Negative | 1881503 - 1881685 | 6608.63 |
| tellurite resistance protein | SAMEA3752620_01768 | Not Available | Negative | 1881689 - 1882048 | 13642.2 |
| putative transport protein | SAMEA3752620_01769 | Not Available | Negative | 1882221 - 1882859 | 23259.0 |
| lysr family transcriptional regulator | SAMEA3752620_01770 | Not Available | Negative | 1882986 - 1883909 | 34646.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





