Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyceraldehyde 3-phosphate dehydrogenase a | SAMEA3752620_01751 | Not Available | Positive | 1864868 - 1865863 | 35534.5 |
| putative aldose 1-epimerase | SAMEA3752620_01752 | Not Available | Positive | 1865947 - 1866831 | 32668.8 |
| putative aldo/keto reductase | SAMEA3752620_01753 | Not Available | Negative | 1866882 - 1867736 | 30986.4 |
| mlta-interacting protein | SAMEA3752620_01754 | Not Available | Negative | 1867826 - 1868572 | 27832.4 |
| serine kinase family protein | SAMEA3752620_01755 | Not Available | Positive | 1869008 - 1870942 | 74484.3 |
| putative cytoplasmic protein | SAMEA3752620_01756 | Not Available | Positive | 1871055 - 1872338 | 49453.2 |
| putative signal transduction protein | SAMEA3752620_01757 | Not Available | Positive | 1872485 - 1873960 | 56042.6 |
| putative signal transduction protein | SAMEA3752620_01758 | Not Available | Positive | 1874141 - 1875631 | 56633.8 |
| ybak/prolyl-trna synthetase-associated domain protein | SAMEA3752620_01759 | Not Available | Positive | 1875674 - 1876177 | 17851.7 |
| inner membrane protein | SAMEA3752620_01760 | Not Available | Positive | 1876452 - 1876898 | 15256.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





