Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative electron transfer flavoprotein beta subunit | SAMEA3752620_01679 | Not Available | Positive | 1792990 - 1793754 | 27450.0 |
| putative electron transfer flavoprotein subunit alpha | SAMEA3752620_01680 | Not Available | Positive | 1793774 - 1794712 | 33794.7 |
| putative flavoprotein | SAMEA3752620_01681 | Not Available | Positive | 1794767 - 1796056 | 45831.6 |
| putative ferrodoxin | SAMEA3752620_01682 | Not Available | Positive | 1796053 - 1796346 | 10699.8 |
| short-chain-fatty-acid--coa ligase (acyl-coa synthetase) | SAMEA3752620_01683 | Not Available | Positive | 1796403 - 1798049 | 60688.5 |
| phosphoenolpyruvate synthase | SAMEA3752620_01684 | Not Available | Negative | 1798106 - 1800484 | 87440.1 |
| pep synthetase regulatory protein | SAMEA3752620_01685 | Not Available | Positive | 1800817 - 1801650 | 31212.7 |
| phospho-2-dehydro-3-deoxyheptonate aldolase | SAMEA3752620_01686 | Not Available | Positive | 1801807 - 1802853 | 38707.3 |
| putative cytoplasmic protein | SAMEA3752620_01687 | Not Available | Positive | 1802985 - 1803176 | 7131.61 |
| putative cytoplasmic protein ydiu | SAMEA3752620_01688 | Not Available | Negative | 1803180 - 1804616 | 54537.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





