Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative fad-binding oxidase | SAMEA3752620_01668 | Not Available | Negative | 1779000 - 1782056 | 113143.0 |
| inner membrane protein | SAMEA3752620_01669 | Not Available | Positive | 1782445 - 1783557 | 39843.7 |
| ydil protein | SAMEA3752620_01671 | Not Available | Positive | 1783986 - 1784342 | 13961.6 |
| major facilitator superfamily protein | SAMEA3752620_01672 | Not Available | Positive | 1784442 - 1785656 | 44562.6 |
| major facilitator superfamily protein | SAMEA3752620_01673 | Not Available | Positive | 1785883 - 1787148 | 46048.0 |
| quinate/shikimate dehydrogenase | SAMEA3752620_01674 | Not Available | Positive | 1787160 - 1788026 | 31229.6 |
| 3-dehydroquinate dehydratase | SAMEA3752620_01675 | Not Available | Positive | 1788057 - 1788815 | 27450.2 |
| putative coa transferase | SAMEA3752620_01676 | Not Available | Positive | 1788960 - 1790555 | 57537.6 |
| putative acyl-coa dehydrogenase | SAMEA3752620_01677 | Not Available | Positive | 1790569 - 1791720 | 43005.5 |
| arac family transcriptional regulator | SAMEA3752620_01678 | Not Available | Negative | 1791763 - 1792674 | 34868.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





