Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| major facilitator superfamily protein | SAMEA3752620_01495 | Not Available | Positive | 1611265 - 1612452 | 42645.5 |
| putative signal transduction protein | SAMEA3752620_01497 | Not Available | Negative | 1612893 - 1613783 | 33978.6 |
| stress response protein | SAMEA3752620_01498 | Not Available | Negative | 1614038 - 1614430 | 14134.9 |
| dipeptidyl carboxypeptidase ii | SAMEA3752620_01499 | Not Available | Negative | 1614795 - 1616840 | 77564.8 |
| starvation sensing protein rspa | SAMEA3752620_01559 | Not Available | Negative | 1667378 - 1668592 | 45971.0 |
| inner membrane protein | SAMEA3752620_01560 | Not Available | Negative | 1668798 - 1669124 | 11906.2 |
| protein | SAMEA3752620_01561 | Not Available | Positive | 1669259 - 1669600 | 12975.4 |
| spermidine n1-acetyltransferase | SAMEA3752620_01562 | Not Available | Positive | 1669635 - 1670195 | 21902.3 |
| lipoprotein | SAMEA3752620_01563 | Not Available | Negative | 1670198 - 1670944 | 27876.0 |
| protein | SAMEA3752620_01564 | Not Available | Positive | 1671016 - 1671321 | 10534.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





