Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | SAMEA3752620_01475 | Not Available | Positive | 1591937 - 1593472 | 55648.5 |
| abc transporter permease | SAMEA3752620_01476 | Not Available | Positive | 1593466 - 1594494 | 36523.3 |
| abc transporter permease | SAMEA3752620_01477 | Not Available | Positive | 1594494 - 1595486 | 34444.6 |
| abc transporter substrate-binding protein | SAMEA3752620_01478 | Not Available | Positive | 1595498 - 1596520 | 36714.9 |
| putative aldolase | SAMEA3752620_01479 | Not Available | Positive | 1596547 - 1597422 | 31806.4 |
| autoinducer-2 (ai-2) modifying protein lsrg | SAMEA3752620_01480 | Not Available | Positive | 1597446 - 1597736 | 11255.4 |
| trans-aconitate methyltransferase | SAMEA3752620_01481 | Not Available | Positive | 1597793 - 1598551 | 29085.4 |
| inner membrane protein | SAMEA3752620_01482 | Not Available | Negative | 1598555 - 1599469 | 34839.0 |
| altronate oxidoreductase | SAMEA3752620_01483 | Not Available | Negative | 1599666 - 1601117 | 54822.4 |
| putative signal transduction protein | SAMEA3752620_01484 | Not Available | Negative | 1601345 - 1602763 | 52093.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





