Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malate dehydrogenase | SAMEA3752620_01445 | Not Available | Negative | 1551135 - 1552832 | 63176.0 |
| 30s ribosomal subunit s22 | SAMEA3752620_01446 | Not Available | Negative | 1552989 - 1553126 | 5096.13 |
| biofilm-dependent modulation protein | SAMEA3752620_01447 | Not Available | Negative | 1553228 - 1553443 | 7988.24 |
| peroxiredoxin (osmotically-inducible protein c) | SAMEA3752620_01448 | Not Available | Positive | 1553788 - 1554219 | 15089.0 |
| heme-regulated cyclic amp phosphodiesterase (direct oxygen sensor protein) | SAMEA3752620_01449 | Not Available | Negative | 1554409 - 1556808 | 90320.6 |
| diguanylate cyclase | SAMEA3752620_01450 | Not Available | Negative | 1556833 - 1557513 | 26153.5 |
| putative signal transduction protein | SAMEA3752620_01451 | Not Available | Negative | 1557556 - 1558215 | 25275.3 |
| putative lipoprotein | SAMEA3752620_01452 | Not Available | Negative | 1558591 - 1559910 | 49635.9 |
| glutamate/gamma-aminobutyrate antiporter (extreme acid sensitivity protein) | SAMEA3752620_01453 | Not Available | Negative | 1560041 - 1561576 | 55097.9 |
| glutamate decarboxylase beta | SAMEA3752620_01454 | Not Available | Negative | 1561732 - 1563132 | 52671.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





