Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| p-protein | SAMEA3752620_01434 | Not Available | Negative | 1540198 - 1541358 | 43090.8 |
| translation inhibitor protein raia | SAMEA3752620_01436 | Not Available | Negative | 1541608 - 1541949 | 12785.3 |
| transposase insg | SAMEA3752620_01437 | Not Available | Negative | 1542210 - 1543220 | 38388.0 |
| transposase insg | SAMEA3752620_01438 | Not Available | Negative | 1543234 - 1543539 | 11385.1 |
| outer membrane protein assembly complex subunit yfio | SAMEA3752620_01439 | Not Available | Negative | 1543661 - 1544398 | 27812.8 |
| 23s rrna pseudouridine synthase | SAMEA3752620_01440 | Not Available | Positive | 1544533 - 1545513 | 37110.8 |
| putative inner membrane protein | SAMEA3752620_01441 | Not Available | Positive | 1545510 - 1546241 | 26372.4 |
| protein disaggregation chaperone | SAMEA3752620_01442 | Not Available | Positive | 1546371 - 1548944 | 95604.9 |
| putative plasmid maintenance protein | SAMEA3752620_01443 | Not Available | Negative | 1549561 - 1549845 | 10401.7 |
| alcohol dehydrogenase | SAMEA3752620_01444 | Not Available | Negative | 1549991 - 1551001 | 35417.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





