Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ssra-binding protein | SAMEA3752620_01414 | Not Available | Negative | 1523724 - 1524206 | 18270.1 |
| putative oligoketide cyclase/lipid transport protein | SAMEA3752620_01415 | Not Available | Positive | 1524365 - 1524814 | 16693.2 |
| rnfh family protein | SAMEA3752620_01416 | Not Available | Positive | 1524804 - 1525094 | 10790.0 |
| putative outer membrane assembly lipoprotein | SAMEA3752620_01417 | Not Available | Negative | 1525156 - 1525497 | 12302.8 |
| dna repair protein | SAMEA3752620_01418 | Not Available | Negative | 1525646 - 1527307 | 61360.1 |
| inorganic polyphosphate/atp-nad kinase | SAMEA3752620_01419 | Not Available | Negative | 1527393 - 1528271 | 32568.3 |
| heat shock protein | SAMEA3752620_01420 | Not Available | Positive | 1528394 - 1528987 | 21799.1 |
| inner membrane protein, upf0053 family | SAMEA3752620_01421 | Not Available | Negative | 1529042 - 1530283 | 46353.9 |
| putative magnesium transport protein | SAMEA3752620_01422 | Not Available | Negative | 1530349 - 1531215 | 32179.6 |
| signal recognition particle protein | SAMEA3752620_01423 | Not Available | Positive | 1531307 - 1532668 | 49790.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





