Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine betaine/l-proline abc transporter atp-binding protein | SAMEA3752620_01394 | Not Available | Negative | 1505432 - 1506634 | 44135.5 |
| ribonucleoside-diphosphate reductase 2 beta chain | SAMEA3752620_01395 | Not Available | Negative | 1506990 - 1507949 | 36451.0 |
| ribonucleoside-diphosphate reductase 2 alpha chain | SAMEA3752620_01396 | Not Available | Negative | 1507959 - 1510103 | 80482.5 |
| ribonucleotide reductase stimulatory protein | SAMEA3752620_01397 | Not Available | Negative | 1510076 - 1510486 | 15341.3 |
| glutaredoxin-like protein | SAMEA3752620_01398 | Not Available | Negative | 1510483 - 1510728 | 9139.98 |
| protein | SAMEA3752620_01399 | Not Available | Negative | 1510976 - 1511305 | 11847.9 |
| protein | SAMEA3752620_01400 | Not Available | Positive | 1511457 - 1511801 | 13066.5 |
| inner membrane protein | SAMEA3752620_01401 | Not Available | Negative | 1511838 - 1512287 | 16968.1 |
| dna-binding protein | SAMEA3752620_01402 | Not Available | Positive | 1512954 - 1513358 | 15359.5 |
| inner membrane protein with hydrolase activity | SAMEA3752620_01403 | Not Available | Negative | 1513405 - 1513929 | 18690.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





