Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate hydrogenlyase subunit 7 | SAMEA3752620_01352 | Not Available | Positive | 1467410 - 1468177 | 27999.7 |
| formate hydrogenlyase maturation protein | SAMEA3752620_01353 | Not Available | Positive | 1468174 - 1468584 | 15465.6 |
| hydrogenase 3 maturation protease | SAMEA3752620_01354 | Not Available | Positive | 1468577 - 1469047 | 17080.6 |
| 6-phospho-beta-glucosidase | SAMEA3752620_01355 | Not Available | Negative | 1469205 - 1470629 | 53802.6 |
| arbutin-, cellobiose-, and salicin-specific pts system eiibc component | SAMEA3752620_01356 | Not Available | Negative | 1470638 - 1472095 | 51035.0 |
| transcriptional regulator | SAMEA3752620_01357 | Not Available | Positive | 1472352 - 1473365 | 36939.5 |
| electron transport protein hydn | SAMEA3752620_01358 | Not Available | Positive | 1473514 - 1474041 | 19027.2 |
| hydrogenase maturation protein hypf | SAMEA3752620_01359 | Not Available | Positive | 1474194 - 1476446 | 81856.5 |
| nitric oxide reductase flrd-nad(+) reductase | SAMEA3752620_01360 | Not Available | Negative | 1476670 - 1477803 | 41280.0 |
| anaerobic nitric oxide reductase flavorubredoxin | SAMEA3752620_01361 | Not Available | Negative | 1477800 - 1479239 | 54264.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





