Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase isoenzymes formation protein | SAMEA3752620_01342 | Not Available | Negative | 1458363 - 1459484 | 41396.7 |
| hydrogenase isoenzymes formation protein | SAMEA3752620_01343 | Not Available | Negative | 1459484 - 1459756 | 9732.58 |
| hydrogenase isoenzymes nickel incorporation protein | SAMEA3752620_01344 | Not Available | Negative | 1459747 - 1460619 | 31566.8 |
| hydrogenase nickel incorporation protein | SAMEA3752620_01345 | Not Available | Negative | 1460623 - 1460973 | 13168.9 |
| formate hydrogenlyase regulatory protein | SAMEA3752620_01346 | Not Available | Positive | 1461185 - 1461646 | 17627.9 |
| formate hydrogenlyase subunit 2 | SAMEA3752620_01347 | Not Available | Positive | 1461771 - 1462382 | 21874.4 |
| formate hydrogenlyase subunit 3 | SAMEA3752620_01348 | Not Available | Positive | 1462379 - 1464205 | 64113.2 |
| formate hydrogenlyase subunit 4 | SAMEA3752620_01349 | Not Available | Positive | 1464208 - 1465131 | 33059.4 |
| formate hydrogenlyase subunit e | SAMEA3752620_01350 | Not Available | Positive | 1465149 - 1466858 | 64984.1 |
| formate hydrogenlyase subunit 6 | SAMEA3752620_01351 | Not Available | Positive | 1466868 - 1467410 | 20329.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





