Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-l-isoaspartate o-methyltransferase | SAMEA3752620_01322 | Not Available | Positive | 1438749 - 1439375 | 23244.2 |
| lipoprotein nlpd | SAMEA3752620_01323 | Not Available | Positive | 1439515 - 1440654 | 40151.3 |
| rna polymerase sigma factor rpos | SAMEA3752620_01324 | Not Available | Positive | 1440717 - 1441709 | 37975.1 |
| regulator | SAMEA3752620_01325 | Not Available | Negative | 1441830 - 1442237 | 15497.9 |
| 4-hydroxybenzoate decarboxylase subunit b | SAMEA3752620_01326 | Not Available | Positive | 1442384 - 1442977 | 21446.2 |
| 4-hydroxybenzoate decarboxylase subunit c | SAMEA3752620_01327 | Not Available | Positive | 1442977 - 1444404 | 52367.8 |
| 4-hydroxybenzoate decarboxylase subunit d | SAMEA3752620_01328 | Not Available | Positive | 1444415 - 1444651 | 9210.16 |
| inner membrane permease ygbn | SAMEA3752620_01329 | Not Available | Negative | 1444689 - 1446053 | 46786.7 |
| hydroxypyruvate isomerase | SAMEA3752620_01330 | Not Available | Negative | 1446142 - 1446918 | 29172.4 |
| aldolase | SAMEA3752620_01331 | Not Available | Negative | 1446923 - 1447561 | 23237.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





