Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkaline phosphatase isozyme conversion protein | SAMEA3752620_01312 | Not Available | Negative | 1430650 - 1431687 | 37873.3 |
| sulfate adenylyltransferase | SAMEA3752620_01313 | Not Available | Positive | 1431939 - 1432847 | 35205.3 |
| sulfate adenylyltransferase | SAMEA3752620_01314 | Not Available | Positive | 1432849 - 1434276 | 52577.5 |
| adenosine 5-phosphosulfate kinase | SAMEA3752620_01315 | Not Available | Positive | 1434276 - 1434881 | 22335.6 |
| putative cytochrome oxidase subunit | SAMEA3752620_01316 | Not Available | Positive | 1434931 - 1435254 | 12018.0 |
| cell division protein | SAMEA3752620_01317 | Not Available | Positive | 1435448 - 1435759 | 11621.8 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | SAMEA3752620_01318 | Not Available | Positive | 1435778 - 1436488 | 25737.7 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | SAMEA3752620_01319 | Not Available | Positive | 1436488 - 1436967 | 16868.5 |
| trna pseudouridine synthase d | SAMEA3752620_01320 | Not Available | Positive | 1436964 - 1438013 | 39228.8 |
| stationary phase survival protein sure | SAMEA3752620_01321 | Not Available | Positive | 1437994 - 1438755 | 26902.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





